Dr. Snehasis Mukhopadhyay, Ph.D.
Professor Department of Computer & Information Science Indiana University - Purdue University - Indianapolis 723 W. Michigan Street SL 280 Indianapolis, Indiana 46202-5132 Email: smukhopa@cs.iupui.edu Telephone: (317)274-9732 Fax: (317)274-9742 |
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RESEARCH PUBLICATIONS | ||||||||
(a) Publications (Refereed Journals and Book Chapters) | |||||||||
1. S. Mukhopadhyay and M.A.L. Thathachar, "Associative Learning of Boolean Functions'', IEEE Transactions on Systems, Man and Cybernetics, pp.1008--1015, Vol.19, No.5, September/October,1989. 2. V. J. Lumelsky, S. Mukhopadhyay and K. Sun, "Dynamic Path Planning in Sensor-Based Terrain Acquisition'', IEEE Transactions on Robotics and Automation, pp.462--472, Vol.6, No.4, August, 1990. 3. K. S. Narendra and S. Mukhopadhyay, "Associative Learning in Random Environments Using Neural Networks'', IEEE Transactions on Neural Networks, pp.20--31, Vol.2, No.1, January, 1991. 4. K. S. Narendra and S. Mukhopadhyay, "Intelligent Control Using Neural Networks'', IEEE Control Systems Magazine, pp. 11--18, April, 1992. (Also in Neuro-Control Systems: Theory and Applications. A Selected Reprinted Volume., Eds. M. M. Gupta and D. H. Rao, IEEE Press, 1994). 5. S. Mukhopadhyay and K. S. Narendra, "Disturbance Rejection in Nonlinear Systems Using Neural Networks'', IEEE Transactions on Neural Networks, pp. 63--72, January, 1993. 6. K. S. Narendra and S. Mukhopadhyay, "Adaptive Control of Nonlinear Multivariable Systems Using Neural Networks'', invited article, Neural Networks, vol. 7, no. 5, pp. 737--752, 1994. 7. K. S. Narendra and S. Mukhopadhyay. “Intelligent Control Using Neural Networks''. Book chapter, in Intelligent Control Systems, Eds. M. M. Gupta and N. K. Sinha, IEEE Press, 1995. 8. K. S. Narendra and S. Mukhopadhyay. “Adaptive Control Using Neural Networks and Approximate Models'', IEEE Transactions on Neural Networks, vol. 8, no. 3, pp. 475--485, May, 1997. 9. J. Mostafa, S. Mukhopadhyay, W. Lam and M. Palakal. “A Multi-level Approach to Intelligent Information Filtering: Model, System, and Evaluation''. ACM Transactions on Information Systems, vol. 15, no. 4, pp. 368--399, October, 1997. 10. R. Raje, S. Mukhopadhyay , M. Boyles, A. Papiez, N. Patel, M. Palakal, and J. Mostafa. “A Bidding Mechanism for Web-Based Agents Involved in Information Classification''. World Wide Web Journal, Special Issue on Distributed World Wide Web Processing: Applications and Techniques for Web Agents, pp. 155--165, 1998. 11. R. R. Raje, S. Mukhopadhyay , M. Boyles, N. Patel, and J. Mostafa. “On Designing and Implementing a Collaborative System Using the Distributed-Object Model of Java-RMI'', Parallel and Distributed Computing Practices Journal -- Editor: Marcin Paprzycki -- Publisher: Nova Science Publishers, Inc., vol. 1, no. 4, pp. 3--14, 1998. Also appeared as a book chapter in Progress in Computer Research, Vol. 1, Pages: 123-134, 2001. 12. R. Raje, M. Qiao, S. Mukhopadhyay , S. Peng , M. Palakal, & J. Mostafa. "Homogeneous Agent-Based Distributed Information Filtering". Cluster Computing, vol. 5, pp. 377-388, 2002. 13. H. Wang, S. Mukhopadhyay, and S. Fang. “Feature Decomposition Architectures for Neural Networks: Algorithms, Error Bounds, and Applications'', International Journal of Neural Systems, vol. 12, no. 1, pp.69-81, 2002. 14. J. Briceno, H. El-Mounayri and S. Mukhopadhyay. "Selecting an Artificial Neural Network for Efficient Modelling and Accurate Simulation of the Milling Process", International Journal of Machine Tools and Manufacture, pp. 663--674, 42(6), 2002. 15. M. Palakal, S. Mukhopadhyay, J. Mostafa, R. Raje, S. Mishra, and M. N'Cho. "An Intelligent Biological Information Management System". Bioinformatics, 18:1283-1288, 2002. (same as conference paper number 26 under (c) below). 16. R. M. Pidaparti, S. Jayanti, M. J. Palakal, and S. Mukhopadhyay. "Structural Integrity Redesign Through Neural-Network Inverse Mapping", AIAA (American Institute of Aeronautics and Astronautics) Journal, vol. 41, no. 1, pp. 119--124. January, 2003.. 17. M. Palakal, M. Stephens, S. Mukhopadhyay, R. Raje, and S. Rhodes. "Identification of Biological Relationships from text documents using efficient computational Methods", Journal of Bioinformatics and Computational Biology (JBCB), vol. 1, no. 2, pp. 1--34, 2003. (Expanded version of conference paper number 27 under (c) below). 18. J. Mostafa, S. Mukhopadhyay and M. Palakal. "Simulation studies of different dimensions of users' interests and their impact on user modeling and information filtering" , vol. 6, no. 2, Information Retrieval, pp. 199--223, April 2003. 19. S. Mukhopadhyay, S. Peng, R. Raje, M. Palakal, and J. Mostafa. "Multi-Agent Information Classification Using Dynamic Acquaintance Lists", vol. 54, no. 10, Journal of the American Society for Information Science and Technology, pp. 966--975, 2003. 20. S. Mukhopadhyay, C. Tang, J. Huang, and M. Palakal. "Genetic Sequence Classification and Its Application to Cross-Species Homology Detection", invited and peer-reviewed, The Journal of VLSI Signal Processing Systems, vol. 35, pp. 273-285, 2003. (Expanded Version of the paper number 28 under (c) Refereed Conference Proceedings). 21. J. Varghese and S. Mukhopadhyay. "Automated Web Navigation Using Multi-agent Adaptive Dynamic Programming'', IEEE Transactions on Systems, Man, and Cybernetics -- Part A: Systems and Humans, vol. 33, no. 3, pp. 412--417, May 2003. 22. R. Raje, D. Zhu, S. Mukhopadhyay, L.Tang, M. Palakal, and J. Mostafa. "COBioSIFTER -- A CORBA-based Distributed Multi-agent Biological Information Management System", Cluster Computing, Vol 7, No. 4, pp.373-389, October, 2004. 23. V. Narayanasamy, S. Mukhopadhyay, M. Palakal, and D. Potter. "TransMiner: Mining Transitive Associations among Biological Objects from Text", Journal of Biomedical Science, vol. 11, no. 6, pp. 864--873, 2004. 24. S. Mukhopadhyay, S. Peng, R. Raje, J. Mostafa, and M. Palakal. "Distributed Multi-Agent Information Filtering: A Comparative Study", accepted (to appear), Journal of the American Society for Information Science and Technology, 2005. 25. M. Palakal, S. Mukhopadhyay, and M. Stephens. "Identification of Biological Relationships from Text Documents", invited, reviewed, and accepted (to appear), Book Chapter, In Medical Informatics: Advances in Knowledge Management and Data Mining in Biomedicine -- Editor: H. Chen, Kluwer Publishers, 2005 (Expected). |
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(b) Publications (Refereed Short Paper in Journal) | |||||||||
1. S. Mukhopadhyay. "Distributed Control and Distributed Computing'', ACM SIGAPP applied computing review: special issue on distributed computing, vol. 7, no. 1, pp. 23-24, 1999. |
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(c) Publications (Refereed Conference Proceedings) | |||||||||
1. V. J. Lumelsky, S. Mukhopadhyay and K. Sun, "Sensor-Based Terrain Acquisition : The `Sightseer' strategy '', IEEE conference on Decision and Control, Tampa , Florida , 1989. 2. V. J. Lumelsky, S. Mukhopadhyay and K. Sun, "Sensor-Based Terrain Acquisition : a `Seed Spreader' Strategy '', 1989 International Workshop on Intelligent Robots and Systems--The Autonomous Mobile Robot and Its application, Tsukuba , Japan , 1989. 3. K. S. Narendra and S. Mukhopadhyay, "Multilevel Control of Dynamical Systems Using Neural Networks'', IEEE Conference on Decision and Control, Brighton , England , 1991. 4. K. S. Narendra and S. Mukhopadhyay, "Intelligent Control Using Neural Networks'', 1991 American Control Conference, Boston , Massachusetts , 1991. 5. K. S. Narendra, S. Mukhopadhyay and A. U. Levin, "Adaptive Control Using Neural Networks'', Seventh Yale Workshop on Adaptive and Learning Systems, Yale University , May 1992. 6. S. Mukhopadhyay and K. S. Narendra, "Disturbance Rejection in Nonlinear Systems Using Neural Networks'', IEEE conference on Decision and Control, Tucson , Arizona , 1992. 7. K. S. Narendra and S. Mukhopadhyay, "Neural Networks in Control Systems'', IEEE conference on Decision and Control, Tucson , Arizona , December, 1992. 8. K. S. Narendra and S. Mukhopadhyay, "Adaptive Control of Nonlinear Multivariable Systems Using Neural Networks'', IEEE conference on Decision and Control, San Antonio , Texas , 1993. 9. S. Mukhopadhyay, J. Mostafa, M. Palakal, W. Lam, L. Xue, and A. Hudli. “An Adaptive Multi-Level Information Filtering System''. Proceedings of the 5th International Conference on User Modeling, pp. 21--28, Hawaii , January, 1996. 10. W. Lam and S. Mukhopadhyay. “A Two-Level Approach to Learning in Nonstationary Environments''. Proc. AI 96 - Canadian Artificial Intelligence Conference, Springer-Verlag, pp. 271--28, May 21--24, 1996. 11. W. Lam, S. Mukhopadhyay, J. Mostafa, and M. Palakal. |
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(d) Publications (Invited Papers and Reviews) | |||||||||
1. K. S. Narendra, S. Mukhopadhyay , C. Xiang, and J. B. D. Cabrera. “Nonlinear Models for Identification and Control'', pp. 19--25, Proc. Ninth Yale Workshop on Adaptive and Learning Systems, Yale University , June 10--12, 1996. 2. S. Mukhopadhyay and K. S. Narendra. "Decentralized Adaptive Control Using Partial Information'', pp. 226--236, Proc. of the Tenth Yale Workshop on Adaptive and Learning Systems, Yale University , June 10--12, 1998. 3. K. S. Narendra, N. Oleng ', and S. Mukhopadhyay. "Decentralized Adaptive Control", pp. 59 -- 99, Proc. of the Eleventh Yale Workshop on Adaptive and Learning Systems, Yale University , June 4--6, 2001. 4. S. Mukhopadhyay. "Book Review: Neural and adaptive Systems: Fundamentals through simulation", Automatica, pp. 1313-1315, vol. 39, 2003. 5. S. Mukhopadhyay, M. Palakal, D. Zhu and R. Raje. "Intelligent Information Management in Bioinformatics", pp. 123--129, Proc. of the Twelfth Yale Workshop on Adaptive and Learning Systems, Yale University , May 28--30, 2003. |
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(e) Publications (Refereed Short Paper in Conference Proceeding) | |||||||||
1. S. Mukhopadhyay. "Distributed Decision-Making by a Team of Neural Networks'', Short Paper, Proceedings of the 37$^{th$ IEEE Conference on Decision and Control, pp. 1082--1083, Tampa , December 16--18, 1998. 2. Y. Fu, T. Bauer, J. Mostafa, M. Palakal, and S. Mukhopadhyay. "Concept Extraction and Association from Cancer Literature", Short Paper, Proceedings of the Eleventh International Conference on Information and Knowledge Management (CIKM2002) / Fourth ACM International Workshop on Web Information and Data Management (ACM WIDM 2002), pp. 100--103, McLean , VA , USA , November 8, 2002 . |
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(f) Publications (Abstracts in Conference Proceedings) | |||||||||
1. M. Boyles, N. Patel, S. Mukhopadhyay, and R. Raje. "A Distributed Environment for Collaborative Information Filtering'', Proceedings of Second Indiana University Undergraduate Research Conference, unnumbered page, 1996. 2. M. Boyles, N. Patel, S. Mukhopadhyay, and R. Raje. "A Collaborative Approach to Information Filtering'', Proceedings of Argonne Symposium for Undergraduates, pg. 33, 1996. 3. M. Boyles, N. Patel, S. Mukhopadhyay, and R. Raje. "The Effects of a Time-Out Period for a Distributed Information Filtering System'', Proceedings of Butler University Undergraduate Research Conference, pg. 37, 1997. |
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(g) Publications (Submitted and Under Review) | |||||||||
1. H. El-Mounayri, S. Mukhopadhyay, and H. Deng. "A Novel Approach for Integrated Modeling and Optimization of End Milling Using Radial Basis Neural Networks", submitted to International Journal of Machine Tools and Manufacture, 2003. 2. V. Narayanasamy, S. Mukhopadhyay, M. Palakal, and D. Potter. "TransMiner: Mining Transitive Associations among Biological Objects from Text", submitted to the Bioinformatics Journal, 2003. 3. V. Narayanasamy, S. Mukhopadhyay, M. Palakal, and J. Mostafa. "TransMiner: Mining Transitive Associations among Biological Objects from Medline", submitted to IEEE Computer Society Bioinformatics Conference, IEEE CSB, 2003. 4. S. Mukhopadhyay, S. Peng , M. Qiao, R. Raje, M. Palakal, and J. Mostafa. "Distributed Multi-Agent Information Filtering", submitted to ACM Transactions on Information Systems, 2002. |
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(h) Other Non-Refereed Publications | |||||||||
1. S. Mukhopadhyay. "Some Applications of Artificial Neural Networks in Engine Control", GM Research & Development Publication AP-24, 1994. 2. S. Mukhopadhyay. "Thermal Modeling of the Engine Exhaust System Using Neural Networks'', GM Research & Development Publication AP-32, 1994. 3. K. S. Narendra and S. Mukhopadhyay. "Decentralized Adaptive Control Using Partial Information'', published as technical report no. 9804, Center for Systems Science, Yale University, November, 1998). |
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(i) Presentations | |||||||||
1. K. S. Narendra and S. Mukhopadhyay, "Intelligent Control Using Neural Networks'', 1991 American Control Conference, Boston , Massachusetts , 1991. 2. S. Mukhopadhyay and K. S. Narendra, "Disturbance Rejection in Nonlinear Systems Using Neural Networks'', IEEE International conference on Decision and Control, Tucson , Arizona , 1992. 3. K. S. Narendra and S. Mukhopadhyay, "Adaptive Control of Nonlinear Multivariable Systems Using Neural Networks'', IEEE International conference on Decision and Control, San Antonio , Texas , 1993. 4. S. Mukhopadhyay. "Principles of Networking'', at the Network Professionals Association Indianapolis Chapter Meeting, March 1995. 5. S. Mukhopadhyay. "Decentralized Adaptive Control'', Tenth Yale Workshop on Adaptive and Learning Systems, New Haven, June 10--12, 1998. 6. M. Palakal, S.Mukhopadhyay, R. Raje, and J. Mostafa. "Knowledge Sharing and Collaboration: Applications in Bioinformatics Research'', Eli Lilly & Company, September 1998. (This presentation helped pave the way for collaboration between Eli Lilly, IUPUI, and IUB) 7. S. Mukhopadhyay. "Distributed Decision-Making by a Team of Neural Networks'', 37$^{th$ IEEE International Conference on Decision and Control, Tampa , December 16--18, 1998. 8. S. Mukhopadhyay, "Adaptation and Learning in Distributed Systems Using Neural Networks'', invited poster presentation, NSF CAREER P.I. Meeting, Jan. 10 -- 12, Washington D.C. , 1999. 9. S. Mukhopadhyay and K. S. Narendra. "Two Problems in Decentralized Adaptive Control Using Neural Networks'', 14th IEEE International Symposium on Intelligent Control/Intelligent Systems and Semiotics (ISIC/ISAS'99), September, 1999. 10. M. Palakal, S. Mukhopadhyay, J. Mostafa, and R. Raje. "An Intelligent Information Filtering System for Digital Libraries'' , invited, the NSF Digital Libraries Initiative All-Projects Meeting -- October 1999. 11. R. Raje, S. Mukhopadhyay, J. Mostafa, and M. Palakal. "On Designing a Multi-Agent System for Distributed Information Filtering'', invited, Special Session on Agents, Brokers & Intermediaries -- Fall 1999 Meeting of the Institute for Operation Research and the Management Sciences (INFORMS) Computing Society -- November 1999. 12. R. Raje, M. Palakal, S. Mukhopadhyay, and J. Mostafa. "SIFTER" - An invited talk in the NSF Digital Libraries Initiative All-Projects Meeting -- Stratford-upon-Avon , England , June 2000. 13. R. Raje, J. Mostafa, S. Mukhopadhyay, and M. Palakal. "D-SIFTER: A Case Study in Designing a Multi-Agent System" - An invited talk in a Special Session on Software Agents -- Spring 2000 Meeting of the Institute for Operation Research and the Management Sciences (INFORMS) Computing Society -- Salt Lake City , UT , May 2000. 14. S. Mukhopadhyay. "Computerized Filtering and Delivery of Biological Information", invited presentation, Department of Biology, IUPUI, October, 2000. 15. S. Mukhopadhyay. "Computerized Delivery and Analysis of Biological Information", invited presentation, Department of Physics, IUPUI, February, 2001. 16. S. Mukhopadhyay and B. Jain. "Multi-Agent Markov Decision Processes with Limited Agent Communication", 2001 IEEE Joint International Conference on Control Applications & International Symposium on Intelligent Control (IEEE CCA/ISIC '01), Mexico City , Mexico , September, 2001. 17. S. Mukhopadhyay. "Intelligent Biological Information Analaysis", University of Cincinnati , March, 2002. 18. S. Mukhopadhyay. "Filtering, Delivery, and Analysis of Biological Information", invited presentation in the symposium titled Genomics Jambalaya: A Recipe for Gene Discovery, The Pittsburgh Conference (Pittcon) 2002, March, 2002. 19. S. Mukhopadhyay. "BioSIFTER: A Biological Information and Knowledge Management System", Mayo Clinic Cancer Center , Mayo Clinic, Rochester , MN, December 6, 2002 . 20. S. Mukhopadhyay. "Intelligent Information Management in Bioinformatics", Twelfth Yale Workshop on Adaptive and Learning Systems, Yale University , New Haven , CT, May 28--30, 2003. 30. S. Mukhopadhyay, M. Palakal, V. Kodiripaka, R. Raje, and J. Mostafa. "Managing Information Flow for Complex, Dynamic Tasks Using Multi-Agent Collaboration", 2003 IEEE International Symposium on Intelligent Control (ISIC 2003), Houston , TX , 2003. 31. V. Narayanasamy, S. Mukhopadhyay, M. Palakal, and D. Potter. "TransMiner: Mining Transitive Associations among Biological Objects from Text", poster presentation at theNIH BISTIC symposium on Digital Biology: The Emerging Paradigm, National Institute of Health, Bethesda , MD , November 6-7, 2003 . 32. S. Mukhopadhyay. "Intelligent Information Management in Bioinformatics", Indiana Bioinformatics Interest Group (IBIG), Indianapolis , March 11, 2004 . 33. S. Mukhopadhyay. "Multi-Agent Learning and Intelligent Systems: Some Recent Results", Department of Mechanical Engineering, IUPUI, October 14, 2004 . |